Spatial Omics - Integrating Biotechnologies, Methodologies and Applications
Videos from IASM Workshop
Ge Gao, Peking University
Monday Jun 16, 2025 09:50 - 10:05
Delineate the regulatory map in silico
Shihua Zhang, Academy of Mathematics and Systems Science, Chinese Academy of Sciences
Monday Jun 16, 2025 10:10 - 10:25
Intelligent decoding of spatial biology
Jinyue LIU, Genome Institue of Singapore
Monday Jun 16, 2025 11:00 - 11:15
Spatial architecture of autism pathogenesis during early development
Corina Nagy, McGill University
Monday Jun 16, 2025 11:20 - 11:35
Cortical Architecture and Cell-Cell Communication in Major Depressive Disorder
Joan Camunas-Soler, University of Gothenburg
Monday Jun 16, 2025 11:40 - 11:55
High-resolution spatial transcriptomics and functional imaging in the human pancreas
Pingzhao Hu, Western University
Monday Jun 16, 2025 14:00 - 14:15
From Histology to Single-Cell Resolution: Decoding Breast Cancer Treatment Response with Spatial and scRNA-seq Data
Jiadong Mao, The University of Melbourne
Monday Jun 16, 2025 14:20 - 14:35
Φ-Space: platform-agnostic cell state identification
Hanyun Zhang, Garvan Institute of Medical Research
Monday Jun 16, 2025 14:40 - 14:55
Mapping tumour microenvironment dynamics during chemotherapy in breast cancer
Jean Yee Hwa Yang, The University of Sydney
Monday Jun 16, 2025 15:30 - 15:45
Extracting single-cell transcriptomic information via prediction from histology images.
Yuanhua Huang, University of Hong Kong
Monday Jun 16, 2025 15:50 - 16:05
Scalable discovery of nucleus-resolved ligand-receptor interaction by fusing spatial RNA-seq and histology images
Mingyao Li, University of Pennsylvania
Monday Jun 16, 2025 16:30 - 16:45
Designing smart spatial omics experiments with S2Omics
Sunduz Keles, University of Wisconsin - Madison
Tuesday Jun 17, 2025 09:30 - 09:45
Learning spatially varying gene-enhancer interactions from spatial multi-modal data
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Tuesday Jun 17, 2025 09:50 - 10:05
Extracting and cross-condition modeling of spatial features from spatial omics data
Xuerui Yang, Tsinghua University
Tuesday Jun 17, 2025 10:10 - 10:25
Dissection of the dynamic landscapes of RNA colocalization with spatial transcriptome data
Boxiang Liu, NUS
Tuesday Jun 17, 2025 11:00 - 11:05
Single-cell RNA sequencing of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases
Ying Zhu, Fudan University
Tuesday Jun 17, 2025 11:20 - 11:35
Decoding Gene Functions: Exploring their Significance in Biological Context
Ellis Patrick, The University of Sydney
Tuesday Jun 17, 2025 15:40 - 15:55
Making Space Count: Strategies for Analysing Spatial Omics Data
Zhenqin Wu, The University of Hong Kong
Tuesday Jun 17, 2025 16:05 - 16:15
Spatial multi-omics and deep learning reveal immunotherapy resistance signatures in hepatocellular carcinoma
Catherine Wong, State Key Laboratory of Complex, Severe and Rare Diseases, Peking Union Medical College Hospital
Tuesday Jun 17, 2025 16:50 - 17:05
MS-based Proteomics in Biological Research and Drug Discovery
Jun Ding, McGill University
Tuesday Jun 17, 2025 17:10 - 17:25
UNAGI: A deep generative model for deciphering cellular dynamics and in-silico drug screening in complex diseases
Xuegong Zhang, Tsinghua University
Wednesday Jun 18, 2025 09:30 - 09:45
Decoding Spatial Cellular Patterns with Al: from Gene Variability to Virtual Tissues
Yue Li, McGill University
Wednesday Jun 18, 2025 09:50 - 10:05
Inferring spatially informed transcriptional programs via topic modeling
Shuangsang Fang, BGI-Research
Wednesday Jun 18, 2025 10:10 - 10:25
Research on Spatiotemporal Single-Cell Omics Algorithms and Tools
Shimin Shuai, Southern University of Science and Technology (SUSTech)
Wednesday Jun 18, 2025 11:00 - 11:15
Leveraging Single-Cell and Spatial Omics for Microbial Detection and RNA Editing Discovery
Yue You, Guangzhou Lab
Wednesday Jun 18, 2025 11:20 - 11:35
A systematic comparison of single-cell perturbation response prediction models.
Matthew Ritchie, The Walter and Eliza Hall Institute of Medical Research
Wednesday Jun 18, 2025 11:40 - 11:55
SpatialBench: Comparative benchmarking of high-resolution spatial transcriptomics platforms using reference tissues
Xingming Zhao, Fudan University
Thursday Jun 19, 2025 09:30 - 09:45
Spatiotemporal transcriptome atlas of the developing human retina
Guanlin Wang, Fudan University
Thursday Jun 19, 2025 09:50 - 10:05
SURF: a self-supervised deep learning method for reference-free deconvolution in spatial transcriptomics
Jiguang Wang, HKUST
Thursday Jun 19, 2025 10:10 - 10:25
Immnue-hot subtype of IDH mutant astrocytoma
Shuqin Zhang, Fudan University
Thursday Jun 19, 2025 11:00 - 11:15
Cell-type annotation and missing gene imputation for single-cell spatial transcriptomics using stAI
Agus Salim, University of Melbourne
Thursday Jun 19, 2025 11:40 - 11:55
SpaNorm: spatially-aware normalisation for spatial transcriptomics data
Peijie Zhou, Peking University
Thursday Jun 19, 2025 15:30 - 15:45
Towards AI Virtual Cells through dynamical generative models
David Shih, Hong Kong University
Thursday Jun 19, 2025 15:50 - 16:05
Towards a biologically relevant statistical framework for gene regulatory network inference
Jian Ma, Carnegie Mellon University
Thursday Jun 19, 2025 16:10 - 16:25
Multiscale delineation of cellular organizations in tissues
Can Yang, The Hong Kong University of Science and Technology
Friday Jun 20, 2025 09:40 - 09:55
A Scalable and Versatile Tool for Analyzing Subcellular Spatial Transcriptomics Data
Zhana Duren, Indiana University
Friday Jun 20, 2025 10:00 - 10:15
Integrated Spatial Omics Network from spatial transcriptomics and single cell multiome data
Special Notice:
The videos for IASM workshop 25w5391 are available here: http://videos.birs.ca/2025/25w5391/.
